Publications

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Journal Article
F. Jonsson, Beke-Somfai, T., Andréasson, J., and Nordén, B., Interactions of a photochromic spiropyran with liposome model membranes, Langmuir, vol. 29, no. 7, pp. 2099 - 2103, 2013.
T. Juhász, Mihály, J., Kohut, G., Németh, C., Liliom, K., and Beke-Somfai, T., The lipid mediator lysophosphatidic acid induces folding of disordered peptides with basic amphipathic character into rare conformations, Scientific Reports, vol. 8, 2018.
M. Quemé-Peña, Juhász, T., Mihály, J., Szigyártó, I. Csilla, Horváti, K., Bosze, S., Henczkó, J., Pályi, B., Németh, C., Varga, Z., Zsila, F., and Beke-Somfai, T., Manipulating Active Structure and Function of Cationic Antimicrobial Peptide CM15 by the Polysulfonated Drug Suramin: A Step Closer to in vivo Complexity, ChemBioChem, 2019.
T. Beke-Somfai, Lincoln, P., and Nordén, B., Mechanical control of ATP synthase function: Activation energy difference between tight and loose binding sites, Biochemistry, vol. 49, no. 3, pp. 401 - 403, 2010.
C. C. Kitts, Beke-Somfai, T., and Nordén, B., Michler's hydrol blue: A sensitive probe for amyloid fibril detection, Biochemistry, vol. 50, no. 17, pp. 3451 - 3461, 2011.
U. Uciechowska-Kaczmarzyk, Babik, S., Zsila, F., Bojarski, K. Kamil, Beke-Somfai, T., and Samsonov, S. A., Molecular dynamics-based model of VEGF-A and its heparin interactions, Journal of Molecular Graphics and Modelling, vol. 82, pp. 157–166, 2018.
G. Kohut, Sieradzan, A., Zsila, F., Juhász, T., Bosze, S., Liwo, A., Samsonov, S. A., and Beke-Somfai, T., The molecular mechanism of structural changes in the antimicrobial peptide CM15 upon complex formation with drug molecule suramin: a computational analysis, Physical Chemistry Chemical Physics, vol. 21, pp. 10644–10659, 2019.
R. Deak, Mihály, J., Szigyártó, I. Cs., Beke-Somfai, T., Turiák, L., Drahos, L., Wacha, A., Bóta, A., and Varga, Z., Nanoerythrosomes tailoring: Lipid induced protein scaffolding in ghost membrane derived vesicles, Materials Science and Engineering: C, p. 110428, 2020.
A. Reymer, Frederick, K. K., Rocha, S., Beke-Somfai, T., Kitts, C. C., Lindquist, S., and Nordén, B., Orientation of aromatic residues in amyloid cores: Structural insights into prion fiber diversity, Proceedings of the National Academy of Sciences of the United States of America, vol. 111, no. 48, pp. 17158 - 17163, 2014.
S. Rocha, Kogan, M., Beke-Somfai, T., and Nordén, B., Probing microscopic orientation in membranes by linear dichroism, Langmuir, vol. 32, pp. 2841–2846, 2016.
G. Kohut, Liwo, A., Bősze, S., Beke-Somfai, T., and Samsonov, S. A., Protein-Ligand Interaction Energy-Based Entropy Calculations: Fundamental Challenges for Flexible Systems, The Journal of Physical Chemistry B, 2018.
T. Beke-Somfai, Lincoln, P., and Nordén, B., Rate of hydrolysis in ATP synthase is fine-tuned by α-subunit motif controlling active site conformation, Proceedings of the National Academy of Sciences of the United States of America, vol. 110, no. 6, pp. 2117 - 2122, 2013.
F. Wang, Li, X., Zhang, F., Liu, X., Hu, P., Beke-Somfai, T., and Lu, X., Revealing Interfacial Lipid Hydrolysis Catalyzed by Phospholipase A1 at Molecular Level via Sum Frequency Generation Vibrational Spectroscopy and Fluorescence Microscopy, Langmuir, vol. 35, pp. 12831–12838, 2019.
C. Wang, Luo, Y., Li, X., Zhang, F., Wang, F., Han, X., Wang, T., Beke-Somfai, T., and Lu, X., Revealing Molecular-Level Interaction between a Polymeric Drug and Model Membrane Via Sum Frequency Generation and Microfluidics, Langmuir, vol. 36, pp. 1615–1622, 2020.
J. R. Johansson, Beke-Somfai, T., Stålsmeden, A. Said, and Kann, N., Ruthenium-Catalyzed Azide Alkyne Cycloaddition Reaction: Scope, Mechanism, and Applications, Chemical reviews, vol. 116, pp. 14726–14768, 2016.
M. Kogan, Feng, B., Nordén, B., Rocha, S., and Beke-Somfai, T., Shear-induced membrane fusion in viscous solutions, Langmuir, vol. 30, no. 17, pp. 4875 - 4878, 2014.
M. Matson, Carlsson, N., Beke-Somfai, T., and Nordén, B., Spectral properties and orientation of voltage-sensitive dyes in lipid membranes, Langmuir, vol. 28, no. 29, pp. 10808 - 10817, 2012.
N. Bosaeus, Reymer, A., Beke-Somfai, T., Brown, T., Takahashi, M., Wittung-Stafshede, P., Rocha, S., and Nordén, B., A stretched conformation of DNA with a biological role?, Quarterly Reviews of Biophysics, vol. 50, 2017.
R. Kiss, Zhu, M., Jójárt, B., Czajlik, A., Solti, K., Fórizs, B., Nagy, É., Zsila, F., Beke-Somfai, T., and Tóth, G., Structural features of human DJ-1 in distinct Cys106 oxidative states and their relevance to its loss of function in disease, Biochimica et Biophysica Acta (BBA) - General Subjects, vol. 1861, pp. 2619–2629, 2017.
V. Harmat, Domokos, K., Menyhárd, D. K., Palló, A., Szeltner, Z., Szamosi, I., Beke-Somfai, T., Náray-Szabó, G., and Polgár, L., Structure and catalysis of acylaminoacyl peptidase: Closed and open subunits of a dimer oligopeptidase, Journal of Biological Chemistry, vol. 286, no. 3, pp. 1987 - 1998, 2011.
L. H. Fornander, Feng, B., Beke-Somfai, T., and Nordén, B., UV transition moments of tyrosine, Journal of Physical Chemistry B, vol. 118, no. 31, pp. 9247 - 9257, 2014.
T. Beke-Somfai and Perczel, A., Zipper-like unfolding of β-sheets accessed by pioneer water molecules: Atomic resolution of forced unfold reveals different mechanisms for parallel and antiparallel motifs, Journal of Physical Chemistry Letters, vol. 1, no. 9, pp. 1341 - 1345, 2010.
J. R. Johansson, Hermansson, E., Nordén, B., Kann, N., and Beke-Somfai, T., δ-Peptides from RuAAC-derived 1,5-disubstituted triazole units, European Journal of Organic Chemistry, vol. 2014, no. 13, pp. 2703 - 2713, 2014.

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